PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17329.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 220aa    MW: 24638.4 Da    PI: 9.7962
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17329.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.4e-1774125155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s ++GVr ++ +g+++AeIrd    + k +r++lg+f+tae Aa a+++a+ + +g
  MCI17329.1  74 SSFRGVRARP-WGKFAAEIRDsT--R-KGARVWLGTFDTAEAAALAYDQAAFSTRG 125
                 679*******.**********32..2.24**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
SWELQEFTNY FNDEDINFNN SSQSQTKEFN STLSFLNNES LQVSSNTTNT QVINETQTTS  60
PPPPPQTIKE SKKSSFRGVR ARPWGKFAAE IRDSTRKGAR VWLGTFDTAE AAALAYDQAA  120
FSTRGSSAVL NFPEALVKAS LKEMAKNSKP LEEGTSPVLA IKNKHTRRKR SNKVIQKKIK  180
SDYHSDQIKT QIKDNTNSQN VLVLEDLGAE YLEQLLSLTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-38ERF family protein