PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI17415.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

GRAS

Protein Properties

Length: 138aa MW: 15197.9 Da PI: 4.2617

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI17415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	29.4	9.6e-10	80	133	2	55
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar 55 ++lL+e+A+a+s+g++e a+++L+r+ ++ +p ++ +Rl +++ AL++r+++ MCI17415.1 80 KQLLMEAATAISEGKMESASEILNRMAQNPNPIMNSDRRLMDCMVSALKSRVNH 133 689************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 138 aa Download sequence
MMDHRFLELE KQLLEDNDEE GEQDAVSGIT NSEWSETIQN LISFEKNPTQ KPDSYSPTSS 60 TTSLNSCSSS VVSPASGCSK QLLMEAATAI SEGKMESASE ILNRMAQNPN PIMNSDRRLM 120 DCMVSALKSR VNHVENPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52510.1	1e-15	GRAS family protein