PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17551.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YB
Protein Properties Length: 82aa    MW: 9631.24 Da    PI: 8.4747
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17551.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB100.71.1e-311801796
       NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96
                m ++lP naki + ake++q   sef++ +t+ea+++c++e+rk i++ddl+wa+ ++Gf+dyv plk+ylk+yr+ + +
  MCI17551.1  1 MXRALPRNAKINNGAKESIQWXXSEFMGIITTEANERCKAEHRKIITADDLIWAMEKFGFDDYVGPLKLYLKNYRDHKDQ 80
                789************************************************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MXRALPRNAK INNGAKESIQ WXXSEFMGII TTEANERCKA EHRKIITADD LIWAMEKFGF  60
DDYVGPLKLY LKNYRDHKDQ TQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.21e-28NF-YB family protein