PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17658.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family HSF
Protein Properties Length: 88aa    MW: 10188.7 Da    PI: 4.7026
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind80.82.1e-252381260
                  HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
  HSF_DNA-bind  2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60
                  Fl k+y ++ed++++++isw+e+g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+Y
    MCI17658.1 23 FLLKTYMLVEDPATDDVISWNEEGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTY 81
                  9*********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MEGVVISEKG LLECGRKCTP SPFLLKTYML VEDPATDDVI SWNEEGTAFV VWQPAEFARD  60
LLPTLFKHSN FSSFVRQLNT YVRIFYMY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.15e-35HSF family protein