PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17840.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 71aa    MW: 8329.26 Da    PI: 8.9815
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17840.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.61.2e-07244344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+   +l+ +a +++  +   +W+ +a+ +g  ++ +++ks++
       MCI17840.1  2 SWTARQNKLFEQALALYDREtpdRWHNVAKVVG--KSVEDVKSHY 44
                     6*****************88************8..9********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    
TSWTARQNKL FEQALALYDR ETPDRWHNVA KVVGKSVEDV KSHYEILKED VQSIEHGRVP  60
FPRYKTNTNN S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.27e-31MYB_related family protein