PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17901.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 221aa    MW: 24056.2 Da    PI: 10.1086
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17901.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS94.22e-29672182150
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 +elL  cA a++ g+l+++q+lL  l+                   AL ++l++s+s++ +   + + +  +     ++l  f+evsP++ f + +aN 
  MCI17901.1  67 EELLNPCAAAITGGNLNRVQHLLYVLHXXXXXXXXXXXXXXXXXXXALTHHLSSSSSSTTSGTITFACT--EPRFFQKSLLKFYEVSPWFSFPNNIANA 163
                 6899**************************************************666665544444443..24555556666***************** PP

        GRAS 101 aIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgsp 150
                  Il+ +++e    + +Hi+D+++s+G+QWp++l+aL+ Rp ++pp +R+T+v ++
  MCI17901.1 164 SILQVLAEEpnnsRSLHILDIGVSHGVQWPTFLEALSRRPgGPPPLVRLTVVTAS 218
                 ******9998888999************************55566*******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
DESGLKKQSQ NQKNKRIKSR PTNEADNGDA AIEGPVVRKP GGNKKGSAKA NGNNSSNGNN  60
KDGRWAEELL NPCAAAITGG NLNRVQHLLY VLHXXXXXXX XXXXXXXXXX XXALTHHLSS  120
SSSSTTSGTI TFACTEPRFF QKSLLKFYEV SPWFSFPNNI ANASILQVLA EEPNNSRSLH  180
ILDIGVSHGV QWPTFLEALS RRPGGPPPLV RLTVVTASST E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.13e-41GRAS family protein