PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17974.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 208aa    MW: 23827.9 Da    PI: 7.2331
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17974.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS54.81.9e-17119208398
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                 ++L++ Ae +++g+  +aq +Larl+++ sp g+p++R+ +y++eAL+  l++++++       ++ s+ + + ++ a+k fse+sP+l+f+++t+
  MCI17974.1 119 DQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFERASFYVKEALQLMLHSNGNN------LNAFSPISFIFKIGAYKSFSEISPVLQFANFTC 208
                 689**************************************************4444......4444445589*********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MNHNQVQFSE NPSFFVPLPY PQVQEQQVFS QNQLKRPLFD XXXXXXXXXX XXXXXXXXXX  60
XXXXXXXXXX XXXXXXHHHL QQHEQQQQSS VVPFTKQQKV SSTIAGDDAS NQLQQSIFDQ  120
LYKTAELIEA GNPVQAQGIL ARLNHQLSPI GKPFERASFY VKEALQLMLH SNGNNLNAFS  180
PISFIFKIGA YKSFSEISPV LQFANFTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-28GRAS family protein