PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI18165.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ZF-HD
Protein Properties Length: 179aa    MW: 19465.6 Da    PI: 6.6117
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI18165.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.55.7e-32114169359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                   vrY+eClkNhAa++Gg+a+DGCgEfmps ge+gt++al+C+AC CHRnFHR+eve 
   MCI18165.1 114 VVRYRECLKNHAAAMGGNATDGCGEFMPS-GEQGTIEALNCSACHCHRNFHRKEVEG 169
                  79**************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MELSSTQDGD IPIPIINNTN NYGGGGGATS NGHAHHMLHH HHHVHDHPTP LHHNHNHGNI  60
ISSSSTAAAV PVXXXXXXXX XXXXXXTTTT TSMQAVSGVE LDHDHSSYKK SSSVVRYREC  120
LKNHAAAMGG NATDGCGEFM PSGEQGTIEA LNCSACHCHR NFHRKEVEGD TEEDSYHHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.14e-30ZF-HD family protein