PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI18206.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 215aa    MW: 23914.1 Da    PI: 8.5061
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI18206.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS1841.1e-56121538242
        GRAS  38 mqRlaayfteALaarlarsvselykalppsetsekn.......sseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLl 129
                 m+Rlaayft AL++ l++    +++  ++++ ++k        +++ l+a++l++++sP++kf+h+taNqaIleav +++rvHi+D+di++G+QW++L+
  MCI18206.1   1 MERLAAYFTDALQTLLYG--ADTAHGTTTNNHHNKLclltrphQTDLLSAFQLLQDMSPYVKFAHFTANQAILEAVTHDRRVHIVDYDIMEGAQWASLI 97 
                 89***************9..3444333333333333677778899****************************************************** PP

        GRAS 130 qaLasRpeg..ppslRiTgvgspesg......skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsl 220
                 q+L+s +eg   p+lRiT+++++++        + +++etg+rL++fA+++g pf f+    ++ e++++++L++ +gEal+ n+v++l +l  +    
  MCI18206.1  98 QSLSSHKEGlpGPHLRITALSRNKERgsgrrsTTATVQETGRRLTSFAASVGQPFTFHQCRLDSDETFQTSSLKLVRGEALVFNCVMHLPHLSYR---A 193
                 ****999662267*********88879999988999***********************9999**************************999843...3 PP

        GRAS 221 eserdevLklvkslsPkvvvvv 242
                 ++ + ++ +  k+l +k+v++v
  MCI18206.1 194 SDSIASFFNGAKELGSKLVTLV 215
                 344569**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MERLAAYFTD ALQTLLYGAD TAHGTTTNNH HNKLCLLTRP HQTDLLSAFQ LLQDMSPYVK  60
FAHFTANQAI LEAVTHDRRV HIVDYDIMEG AQWASLIQSL SSHKEGLPGP HLRITALSRN  120
KERGSGRRST TATVQETGRR LTSFAASVGQ PFTFHQCRLD SDETFQTSSL KLVRGEALVF  180
NCVMHLPHLS YRASDSIASF FNGAKELGSK LVTLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.19e-70GRAS family protein