PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI18280.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 176aa    MW: 19779.2 Da    PI: 3.7403
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI18280.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.71e-09114159147
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                 kfY+ +Ak+ GF vrk +  k+ + g ++++tf+C+ eg+r+++  +
  MCI18280.1 114 KFYCWFAKMNGFAVRKGQVIKN-KAGDVVQQTFMCNLEGFRKDSGLT 159
                 6********************9.5566**************998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
SGFDAEDVNA DVNVGDSADY EYIVYEEDES EGGEFDGDES DFGDCDDFSK SENTVVDDLD  60
ENSDTDNETT HSDENAEELF IIDDADDIVK IDMFNLNNED VSKLQFGSLE VAYKFYCWFA  120
KMNGFAVRKG QVIKNKAGDV VQQTFMCNLE GFRKDSGLTI EMRMHGPKHE TSTVAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.17e-07FAR1 family protein