PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI18327.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-X1
Protein Properties Length: 159aa    MW: 17821.9 Da    PI: 9.2561
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI18327.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X1248.4e-086179119
    zf-NF-X1  1 CGkHkCqklCHeGpCppCp 19
                CG+H+C+  CH GpC+pC+
  MCI18327.1 61 CGRHRCENACHVGPCDPCQ 79
                ******************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
RKDQLCPHAC VLQCHPGPCP PCKAFAPPRL CPCGKKRIAT RCSDRQSDLT CGQRCDKLLN  60
CGRHRCENAC HVGPCDPCQV LINASCFCSK MMQAAVVNVN FYQAGLRHAV VEKQSWRTNG  120
RVVWIRYLHA HKYVASSFLA GYMLVRSHAM LGNVHRVRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.12e-48NF-X1 family protein