PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI18369.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family HSF
Protein Properties Length: 39aa    MW: 4437.99 Da    PI: 3.6464
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI18369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind36.21.6e-11239946
                  HHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHST CS
  HSF_DNA-bind  9 iledeelkeliswsengnsfvvldeeefakkvLpkyFk 46
                  ++ed++++++isw+e+g++fvv+++ efa+++Lp+ Fk
    MCI18369.1  2 LVEDPATDDVISWNEEGSAFVVWQPAEFARDLLPTLFK 39
                  799**********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 39 aa     Download sequence    
MLVEDPATDD VISWNEEGSA FVVWQPAEFA RDLLPTLFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.14e-20HSF family protein