PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI18486.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

SBP

Protein Properties

Length: 119aa MW: 13726.2 Da PI: 8.1289

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI18486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	44	6e-14	1	30	49	78
EEETTT--SS--S-STTTT-------S--- CS SBP 49 fhelsefDeekrsCrrrLakhnerrrkkqa 78 fh +sefD++krsCrrrLa+hnerrrk+++ MCI18486.1 1 FHVVSEFDDSKRSCRRRLAGHNERRRKSSH 30 9**************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 119 aa Download sequence
FHVVSEFDDS KRSCRRRLAG HNERRRKSSH DSVARNSSQG GCALSLLSSR TDSWLSPADL 60 SVRCSAALSE LIAENRAAIM ARQYVSDRDW HLHHHAMEDY REIQPESNYF PQQMFPQTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15270.1	6e-13	SBP family protein