PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI18595.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

LBD

Protein Properties

Length: 113aa MW: 12270.5 Da PI: 4.7107

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI18595.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	57.7	3.5e-18	2	53	49	100
DUF260 49 lpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 lpe++r da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++la++++e MCI18595.1 2 LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAE 53 799********************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 113 aa Download sequence
DLPEHQRGDA VSSMVYEANA RVRDPVYGCV GAISSLQQQI DVLQTQLAVA QAEAVHLRVR 60 QTASSFWNSA GHSPTSPTYS GSPSSKINES QAKHIFDMDM VVDQDGYGGD SMW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	2e-29	LBD family protein