PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI18786.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 152aa    MW: 17016 Da    PI: 4.2124
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI18786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.69.7e-16146655
         AP2  6 VrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                Vr+++ +g+W+AeIrdp    +r kr +lg+f taeeAa+ +++ +  l+g
  MCI18786.1  1 VRQRP-WGKWAAEIRDP----IRrKRLWLGTFKTAEEAAAEYDRVAVMLKG 46
                9****.**********7....246*******************99987776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
VRQRPWGKWA AEIRDPIRRK RLWLGTFKTA EEAAAEYDRV AVMLKGPNAV TNFPVTTTEA  60
ETEVPPPENN SGGINGGACY SDVLASPTSV LTYCDSTPFD GFRYGDVDAF GFNIDAPLSL  120
PEVNVTLTCH QKLEKEEAFE EFDLDEFMTW PY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.19e-28ERF family protein