PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI19329.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 198aa    MW: 21881.2 Da    PI: 4.3049
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI19329.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS28.12.4e-09142197155
        GRAS   1 lvelLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlar 55 
                 l+e+Ll cA+avs+gd   a+  + + l +++s +gdp+qRl ay++e+L+arl +
  MCI19329.1 142 LKEVLLLCAQAVSDGDIPTARGWMDNvLVKMVSVAGDPIQRLSAYLLEGLRARLES 197
                 5789******************998625677**********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MQRQFYHQSD LSFGTMKEEC FPLESYPEIA AFIDCDSPSY ASVSSSKSPF SPQDSQSQSC  60
HSDHQQSSDN TYGSPISGMS SVDDGHDLKH KLRELENSLL GSDDFDIVDS YGNCMETRLH  120
GASPSAKYDW DLIAENIQKL DLKEVLLLCA QAVSDGDIPT ARGWMDNVLV KMVSVAGDPI  180
QRLSAYLLEG LRARLESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.19e-28GRAS family protein