PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI19367.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YA
Protein Properties Length: 81aa    MW: 9661.24 Da    PI: 11.5697
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI19367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.92.9e-321470158
   CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                +ep+YVNaKQy++Il+RRq+Rak+e ekk+ +k rkpylheSR+ hAlrR+Rg+gGrF
  MCI19367.1 14 EEPVYVNAKQYHGILRRRQSRAKAELEKKV-IKVRKPYLHESRRLHALRRARGNGGRF 70
                69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MHHARVLLPL EMEEEPVYVN AKQYHGILRR RQSRAKAELE KKVIKVRKPY LHESRRLHAL  60
RRARGNGGRF LNTKKLEHNN S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.18e-29NF-YA family protein