PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI19696.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 212aa    MW: 25072.9 Da    PI: 4.6712
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI19696.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix507.9e-16895186
    trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86
                +Wt++ + +L+e+  e+  +l+r++l+   W evs+k+ +e ++ers +qC++ ++++++rykk+k ++ +     +s ++p+f++++
  MCI19696.1  8 EWTEHATFVLLEIWGEKFLQLGRNSLRSEEWHEVSEKVsEELKIERSVEQCRSVLDKVKRRYKKEKSRMDEMgLGVNSCKWPFFKRMD 95
                5*************************************8889************************9999985688889********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
GGSSGSEEWT EHATFVLLEI WGEKFLQLGR NSLRSEEWHE VSEKVSEELK IERSVEQCRS  60
VLDKVKRRYK KEKSRMDEMG LGVNSCKWPF FKRMDMLMSS SARQEYGLAC GVDSGEYVFM  120
NTRVYLNRSN GFDEMRDSPX XXXXXXXXXX XXXXXXDDDD FDEVDKEEEE ASYRVLADSI  180
QKFGKIYEKI ENTKRQQMME LEKMRLDFNR EL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.12e-73Trihelix family protein