PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI19725.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 168aa    MW: 18967.8 Da    PI: 8.8075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI19725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.84.1e-213282256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g+
  MCI19725.1 32 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRGN 82
                7********.**********7.....337*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
TEATTPTSTS NATQSNEAAA TNEEETGEKR RRYRGVRQRP WGKWAAEIRD PHKAARVWLG  60
TFDTAEAAAR AYDEAALRFR GNRAKLNFPE NVTSTRPNFP ANTSTVSNSP ATHYSPAPPQ  120
PLQMQTQPPF VQFQGTSDLL RDYYQYSQLL KGSGDFQGLE QWFYESQM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12833EKRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.18e-25ERF family protein