PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI19763.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 80aa    MW: 9314.42 Da    PI: 4.5579
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI19763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.18.3e-081458244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      +WT    +++  a + +  +    W++Ia+ +  g++++++k ++
       MCI19763.1 14 PNWTRKQNKQFEVALTIHREDtpdKWEKIAEAVD-GKSAEEVKIHY 58
                     58******************9*************.********999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    
MASSSEYDNI EYTPNWTRKQ NKQFEVALTI HREDTPDKWE KIAEAVDGKS AEEVKIHYEI  60
LVEMIKDIES GKVPIPDYKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.12e-25MYB_related family protein