PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI19880.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

Dof

Protein Properties

Length: 172aa MW: 18277.2 Da PI: 10.816

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI19880.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123	1e-38	58	116	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++kcprC+stntkfCyynny+lsqPr+fCk+CrryWt+GGalrnvPvGgg+r+n+k+s MCI19880.1 58 ATQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKRS 116 5689**************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
QAGIGIGTQN SSLPLQQPSA STVTVTVAAD GSYQGSIRQR SMTDQAKMSK IHQNDVAATQ 60 KCPRCESTNT KFCYYNNYNL SQPRHFCKTC RRYWTRGGAL RNVPVGGGCR RNNKRSKGNS 120 ISKSTSKPNR NDHRLVGTGG GGGGSSSASA NSSSNNGCTN SNVNVGISHF PT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	2e-37	Dof family protein