PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI20309.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

TCP

Protein Properties

Length: 166aa MW: 19021.7 Da PI: 9.8509

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI20309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.5	2.8e-35	18	81	2	65
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65 g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LGfd++sk+++WL+++akpai++l ++ MCI20309.1 18 RGRKDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGFDRPSKALDWLINKAKPAIDQLDQL 81 689*********************************************************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MNGGEIVEVD GGHIIRSRGR KDRHSKVCTA KGPRDRRVRL SAHTAIEFYD VQDRLGFDRP 60 SKALDWLINK AKPAIDQLDQ LPPWKPXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXFRF 120 LQNFNSNSNG FVPFESEIGE TTSSSPIQFP DLLSRTNSND LRLSLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	5e-48	TCP family protein