PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI20371.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

WRKY

Protein Properties

Length: 182aa MW: 20689.7 Da PI: 4.2117

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI20371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	35.1	2.6e-11	2	31	30	59
TT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 30 agCpvkkkversaedpkvveitYegeHnhe 59 +gC++kk+vers++d ++++itY+++Hnh+ MCI20371.1 2 KGCSAKKQVERSSTDASMLIITYTSKHNHP 31 68***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
SKGCSAKKQV ERSSTDASML IITYTSKHNH PDPTAVSATN SAQQPKESET ETIKDLPITS 60 KEEDQEHIVE EMINNKSIVT STDQVTNEEN FHYLQSPIHC SEEIIIDQED PFKLNIEKNX 120 IDKIDILLEE EPLCYAQLKN LTESKSEELD FFDELEELPM SSSILHFTRS IFSDERIPVA 180 PS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	5e-13	WRKY family protein