PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI20411.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 205aa    MW: 23365.1 Da    PI: 9.0894
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI20411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix93.81.7e-2988173186
    trihelix   1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW++ ev+aLi++r+ +e++++  g++    Wee+s++mr+rg++rs+k+Ckekwen+nk+yk++  + kkr + +s+tc+yfd+l+
  MCI20411.1  88 RWPDVEVQALIAVRTALEHKFGHmGSKGSSIWEEISDAMRDRGYNRSAKKCKEKWENINKYYKRTVGSGKKR-PLNSKTCSYFDELD 173
                 8*********************846777999*************************************9997.9***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
RSLALISYIQ KLLRQEIQIP QPEEESQKLL SRAIQIFQPA EGSGKREEGD VALSNNKRDF  60
NGDPSNNRWP VVVNNNKRDF NGEPCNNRWP DVEVQALIAV RTALEHKFGH MGSKGSSIWE  120
EISDAMRDRG YNRSAKKCKE KWENINKYYK RTVGSGKKRP LNSKTCSYFD ELDNLYRNGS  180
SNSLGNALTI TNNVSISEEK EQGEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.23e-33Trihelix family protein