PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI20570.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 82aa    MW: 9229.98 Da    PI: 3.8865
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI20570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding271.1e-08855246
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     g+W++e+ + + +a+  + ++   +W+ +a+ +g g+t++++  ++  
       MCI20570.1  8 GSWSAEDNKAFERAIVDFDKDtpdRWSNVAQVVGGGKTPEDVERHYEL 55
                     89*******************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MASISATGSW SAEDNKAFER AIVDFDKDTP DRWSNVAQVV GGGKTPEDVE RHYELLLRDI  60
NLVESDQVPL PNYNDVESFD EE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.14e-28MYB_related family protein