PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI20672.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 166aa    MW: 18825.6 Da    PI: 7.5033
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI20672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS198.83.2e-611165204374
        GRAS 204 VnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvaceg 302
                 Vn v +lhr++       ++  ++L+++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p es  r+kvE+ ++++ei+n+vaceg
  MCI20672.1   1 VNTVNRLHRVP------GNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPVESAPRAKVEQYIFAPEIRNIVACEG 93 
                 89999999999......444557**************************************************************************** PP

        GRAS 303 aerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +er+erhe+lekWr+ +e  GFk vpls +a++q + ll  ++ dgyr+ e++g+l+lgW+dr+++++SaWr
  MCI20672.1  94 EERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWR 165
                 ***********************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
VNTVNRLHRV PGNHLGNLLS MIRDQAPNIV TLVEQEASHN GPYFLGRFLE ALHYYSAIFD  60
SLDATFPVES APRAKVEQYI FAPEIRNIVA CEGEERIERH ERLEKWRKIM EGKGFKGVPL  120
SPNAVTQSRI LLGLYSCDGY RLTEDKGCLL LGWQDRAIIA ASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.16e-48GRAS family protein