PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI20822.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 163aa    MW: 18996.7 Da    PI: 8.2179
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI20822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS190.51.1e-582161214374
        GRAS 214 ldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetl 312
                 +desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F++rf+e+++yy+a+f+s+++  ++++++ri+ E+ +++r+ivn++aceg er+erhe +
  MCI20822.1   2 PDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGVERVERHEVF 100
                 799************************************************************************************************ PP

        GRAS 313 ekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +kWr+r+ +aGF++ +ls++++ +++ ll+ ++++ yr+e+++g+++lgW++r++ + SaWr
  MCI20822.1 101 GKWRMRFAMAGFRQCSLSSSVMHSVQNLLKDYNQN-YRLEHRDGAIYLGWMKRAMATSSAWR 161
                 *********************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MPDESVSIEN HRDRLLRLVK SLSPKVVTLV EQESNTNTSP FFHRFVETMD YYTAMFESID  60
VACAKDDKKR ISTEQNCVAR DIVNMIACEG VERVERHEVF GKWRMRFAMA GFRQCSLSSS  120
VMHSVQNLLK DYNQNYRLEH RDGAIYLGWM KRAMATSSAW RCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.12e-79GRAS family protein