PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI20957.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GeBP
Protein Properties Length: 153aa    MW: 17858.6 Da    PI: 10.3938
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI20957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57379.74.5e-2515109397
      DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvs.ksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 ++rl+s +Dei+l  Gl+dfk++tg +p++ ++ fy+  k+s+s+k + ++q+ +Ki +LK+K+k++ kk k++ +  f+  h+++ fels+ +Wg
  MCI20957.1  15 PKRLFSPDDEIILVNGLLDFKSRTGIDPTKILNVFYNAHKHSVSVKTTtQKQFRDKICKLKQKYKENLKK-KKQGSLIFADRHEENLFELSNEFWG 109
                 79******************************************9875278*******************.6666789*****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MAGNQKQSSS QMVKPKRLFS PDDEIILVNG LLDFKSRTGI DPTKILNVFY NAHKHSVSVK  60
TTTQKQFRDK ICKLKQKYKE NLKKKKQGSL IFADRHEENL FELSNEFWGG ENGADNMRMN  120
VLKRAELDRR CVQLKVQEEK LRLQRALLVE EHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.14e-10GeBP family protein