PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI21052.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 156aa    MW: 17283.4 Da    PI: 8.0169
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI21052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.32.7e-0582102323
                 ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                 C+ Cgk F++   L  H+ +H
  MCI21052.1  82 CKECGKGFPSLKALCGHMASH 102
                 *******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MTEERTHAAA IAAAADNNNN THIFKRDFEP VVALSDGGNG NPIYGLRENP KKTIKFVHSH  60
NHVVAAAAAA TTALEHEMIK FCKECGKGFP SLKALCGHMA SHSEKEKKIN KFYQMEDTQS  120
DDTDDDDDDT CVVAASTMNL RKNKRRIRNN KRLLGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.13e-15C2H2 family protein