PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI21142.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

MYB

Protein Properties

Length: 74aa MW: 8400.48 Da PI: 10.2147

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI21142.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.1	2.7e-10	1	31	18	48
HTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 18 qlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++G g+W+++ ++ g+ R++k+c++rw ++l MCI21142.1 1 KHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 31 7**************************9996 PP
2	Myb_DNA-binding	22.2	3.2e-07	37	60	1	25
TSSS-HHHHHHHHHHHHHTTTT-HH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWk 25 +g++T+eE++l+++++ ++G++ W+ MCI21142.1 37 KGSFTAEEEQLIAQLHSEMGNR-WA 60 799******************.8 PP

Sequence ? help Back to Top
Protein Sequence Length: 74 aa Download sequence
KHGEGNWNAV QKHSGLSRCG KSCRLRWANH LRPNLKKGSF TAEEEQLIAQ LHSEMGNRWA 60 RDVSDVNIFL VSSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	1e-35	MYB family protein