PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI21345.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family HB-other
Protein Properties Length: 72aa    MW: 8159.3 Da    PI: 8.7391
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI21345.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.53.1e-102672345
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVk 45
                k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+k
  MCI21345.1 26 KYVRYTSEQVEALERVYAECPKPSSMRRQQLIRECpilsNIEPKQIK 72
                5679********************************9999**99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    
MAMAVAHHRE SSSSGGSIDK HLDSGKYVRY TSEQVEALER VYAECPKPSS MRRQQLIREC  60
PILSNIEPKQ IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.16e-34HD-ZIP family protein