PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI21456.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YC
Protein Properties Length: 203aa    MW: 22242 Da    PI: 9.7498
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI21456.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC36.41.1e-11167203134
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkade 34 
                 ql++fw++q   ++k++dfk+h lPlarikki+kade
  MCI21456.1 167 QLQAFWANQyqeVKKVSDFKKHCLPLARIKKIMKADE 203
                 89******98788899*******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
RGHNQNPPTG SVGSADRWPF EFINGEPLSV VRSVGGMQAT GQPAGAQLGQ QQQHNQNPFV  60
GSINNWPFGY MAFQPNHIMT GAPGPVVTSL GGMQSTGQPA GTQLGQHQLA YQQQLQQQLQ  120
GFWAYQMTGX PGSAXTSVXG MQSTXQLVGA QLGQHQLAYQ HIQQQQQLQA FWANQYQEVK  180
KVSDFKKHCL PLARIKKIMK ADE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.32e-08NF-YC family protein