PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI21489.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 94aa    MW: 11273 Da    PI: 7.347
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI21489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS58.71.2e-18193267359
        GRAS 267 lfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv 359
                 +fd l+++++re+  r + E+        n +aceg+er+er et+++W+ r  +aGF+++pl+++  ++ ++ l+ v+   +++ e+ ++++
  MCI21489.1   1 MFDVLDVNVAREDPMRLMFEKXXXXXXXXNTIACEGSERVERPETYKQWQFRNIRAGFRQLPLDKHLINKLRCKLKDVYHSDFMLVEDGNCML 93 
                 7******************************************************************************777********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MFDVLDVNVA REDPMRLMFE KXXXXXXXXN TIACEGSERV ERPETYKQWQ FRNIRAGFRQ  60
LPLDKHLINK LRCKLKDVYH SDFMLVEDGN CMLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.12e-32GRAS family protein