PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI22010.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 190aa    MW: 21209.6 Da    PI: 6.6773
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI22010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.72.5e-2447148199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f k+lt+sd+++ g +++p+ +ae++        +++ +  +  +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF   + +++ l+
  MCI22010.1  47 FAKTLTQSDANNGGGFSVPRYCAETIfprldyAADPPLQ-NILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLIAGDSIVFL--RAENGDLC 142
                 89*****************************95455553.7999*********************************************..4488999* PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 v+++r+
  MCI22010.1 143 VGIRRA 148
                 ***997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MADPETDEVY AKIKLFPLSG NGNGNGNDGQ DYYGNDIVEN QDKPVSFAKT LTQSDANNGG  60
GFSVPRYCAE TIFPRLDYAA DPPLQNILAK DVHGETWKFR HIYRGTPRRH LLTTGWSTFV  120
NHKKLIAGDS IVFLRAENGD LCVGIRRAKK GIGGGHEDPS GWNPVGENFP LPWFTQNENQ  180
MMRNINDNNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.17e-70ARF family protein