PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI22244.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 65aa    MW: 7627.88 Da    PI: 10.5865
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI22244.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM87.32.8e-2726554118
         NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgek 118
                 +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ +++lvg+kktLvfykgrapkgek
  MCI22244.1   2 GEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR-GKSLVGMKKTLVFYKGRAPKGEK 65 
                 579**************************************.999*****************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 65 aa     Download sequence    
MGEKEWYFFC VRDRKYPTGL RTNRATEAGY WKATGKDKEI YRGKSLVGMK KTLVFYKGRA  60
PKGEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.13e-43NAC family protein