PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI22249.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

LFY

Protein Properties

Length: 99aa MW: 11249.8 Da PI: 8.6537

Description

LFY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI22249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FLO_LFY	190.8	1e-58	1	85	302	386
FLO_LFY 302 mrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386 mrhYvhCYalhcLdee sn+lrr fkergenvGawrqacykplvaiaarqgwdida+fnahprLsiWYvPtkLrqLCh+er+ a+ MCI22249.1 1 MRHYVHCYALHCLDEEVSNELRRGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNGAA 85 9********************************************************************************9765 PP

Sequence ? help Back to Top
Protein Sequence Length: 99 aa Download sequence
MRHYVHCYAL HCLDEEVSNE LRRGFKERGE NVGAWRQACY KPLVAIAARQ GWDIDAIFNA 60 HPRLSIWYVP TKLRQLCHAE RNGAAASSSV SVGTTHLPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61850.1	2e-51	LFY family protein