PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI22546.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 176aa    MW: 20126.2 Da    PI: 8.7648
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI22546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.13.8e-3375130359
                 -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh 
  MCI22546.1  75 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSF-DGEIAEIVYKGEHNHG 130
                 9***************************************.***************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
TNQQQSQQSV ETNIQHLNHD KFRSNISSNF HQNITLPKET YQQVTEPCKT AQQNMEEDQK  60
ALTPSTMNAD KPSYDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSFDGEIAE  120
IVYKGEHNHG KPQLQKRNAG AAQGSGMVSD GLVQDILNNN QNERIEGRME NHVKAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.19e-38WRKY family protein