PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI23379.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 134aa    MW: 15190.5 Da    PI: 11.0608
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI23379.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2538.7e-1753103155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr++  + +Wv+e r+p   +k+++++lg+f t e+Aa+a++ a+ +l+g
  MCI23379.1  53 PVYRGVRRRN-NDKWVCEMREP---NKKTKIWLGTFPTVEMAARAHDVAAMALRG 103
                 68*****887.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MFPTNNSSSS SDMSLSNSEG SHWMPVVNEE VRLAATTPKK RAGRKKFKET RHPVYRGVRR  60
RNNDKWVCEM REPNKKTKIW LGTFPTVEMA ARAHDVAAMA LRGRYACLNF ADSVWRLPKP  120
ATAQAKDIQK AATL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.19e-47ERF family protein