PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI23574.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 78aa    MW: 9122.32 Da    PI: 9.4416
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI23574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.95.4e-064059525
                --SGGGGTS--TTTTT-SS-S CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaH 25
                +C+f+ r G+C +G+ C++ H
  MCI23574.1 40 ICSFYIR-GECTRGAECPYRH 59
                6**9999.**********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MLQARAGIDY ESSFGKARPN DTILKLQRTT PYYKRNRAHI CSFYIRGECT RGAECPYRHE  60
MPVTGELSQQ NIKDRYYG