PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI23685.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 130aa    MW: 15091.4 Da    PI: 10.0204
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI23685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000126890123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                + C +C+k F  + + ++H +++
  MCI23685.1 68 FMCRKCSKAFAVRGDWRTHEKNC 90
                89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MHMWGHGSQY RKGPESLRGT QPTGMLRLPC YCCAQGCRNN IDHPRAKPLK DFRTLQTHYK  60
RKHGIKPFMC RKCSKAFAVR GDWRTHEKNC GKLWYCICGS DFKHKRSLKD HIKAFGNGHA  120
AYGFDGFEEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.12e-93C2H2 family protein