PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI23754.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 75aa    MW: 8541.7 Da    PI: 7.6157
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI23754.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.12e-101875153
                EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..E CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyr 53
                f+k+lt sd++++g +++p++ ae++       + +++  ++++ +d++  +W++++iyr
  MCI23754.1 18 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIVAKDLHDTTWTFRHIYR 75
                99*****************************954.4444.48***************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
MLASDMGLKQ NQQPTEFFCK TLTASDTSTH GGFSVPRRAA EKIFPPLDFS MQPPAQEIVA  60
KDLHDTTWTF RHIYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.12e-47ARF family protein