PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI24180.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 79aa    MW: 9214.63 Da    PI: 10.5539
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI24180.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.91.3e-19552148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed  l ++v+ +G g+W+++ar+ g++Rt+k+c++rw++yl
       MCI24180.1  5 KGPWTEDEDAVLMNYVAVHGEGHWNSVARCSGLKRTGKSCRLRWLNYL 52
                     79*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MVIKKGPWTE DEDAVLMNYV AVHGEGHWNS VARCSGLKRT GKSCRLRWLN YLRPNVRRGN  60
ITLQEQILIL DLHSRWGNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47190.11e-41MYB family protein