PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI24319.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 164aa    MW: 18186.9 Da    PI: 6.6757
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI24319.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS146.52.6e-4514160226374
        GRAS 226 evLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGF 324
                  +L+l+ +l+Pk+++ veq+++h ++sFl+rf+eal+yysalfd+l  +l+ +s er++vE++llg ei+n++a  g +r+ + + +e+W + l+++GF
  MCI24319.1  14 GTLRLLSQLRPKLITTVEQDLSH-AGSFLARFVEALHYYSALFDALGDGLGVDSVERHMVEQQLLGCEIRNIIAVGGPKRTGEVK-VERWGDELKRVGF 110
                 58*********************.899****************************************************998887.9************ PP

        GRAS 325 kpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +p++l+ + a+qa+lll +++++gy++ ee+gsl lgWkd +L+ +SaW+
  MCI24319.1 111 RPISLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQ 160
                 *************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MHHCLYDITG SDLGTLRLLS QLRPKLITTV EQDLSHAGSF LARFVEALHY YSALFDALGD  60
GLGVDSVERH MVEQQLLGCE IRNIIAVGGP KRTGEVKVER WGDELKRVGF RPISLRGNPA  120
AQASLLLGMF PWRGYTLVEE NGSLKLGWKD LSLLIASAWQ PSDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.12e-74GRAS family protein