PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI24850.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 150aa    MW: 16773.1 Da    PI: 10.8271
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI24850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2461.3e-1457107155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr +    +Wv+e r+p   +k+++++lg+f tae+Aa+a++ a  +l+g
  MCI24850.1  57 PVYRGVRTRN-LDKWVCEMREP---NKKTKIWLGTFPTAEMAARAHDVASMALRG 107
                 68****9666.9******9998...347*********************999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MFTTNNSFSS NPSTSDTSLS NSEGSYGMSV TNDEVRLAVS TPKKRAGRKK FKETRHPVYR  60
GVRTRNLDKW VCEMREPNKK TKIWLGTFPT AEMAARAHDV ASMALRGRYA CLNFADSAWR  120
LPKPATTQAK DIQKAAVLAA EAFRPDKTLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.11e-57ERF family protein