PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI25065.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 148aa    MW: 16301 Da    PI: 6.4897
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI25065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.17.2e-095979526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                +C +far G+Ck G +C+F Hg
  MCI25065.1 59 PCLYFAR-GYCKNGTSCRFLHG 79
                8******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
PVDDFQLQDQ LSFLNDGSDS STLFPSYGYG GNSLHRRSCS VNDACLGSED PNSGLGWKPC  60
LYFARGYCKN GTSCRFLHGD VDGGSATIVG SPNKVEMMDQ CHHHELLRSK STHQQRLAAA  120
SQLMASNSFP YSPKCMNFLL QQQQNDTQ