PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI25114.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 135aa    MW: 15136.9 Da    PI: 6.671
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI25114.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.8e-056587123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++Cg  F++   L  H+r+H
  MCI25114.1 65 HECSICGAEFTSGQALGGHMRRH 87
                79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MKEEKQSSPP QPRQIATTTG EFEEENNQIH TKNITTINPL VPPVSLELRC GVNINFKPNK  60
LNKIHECSIC GAEFTSGQAL GGHMRRHRAS IDKSNNKNNN VVAFEGVHVK SRNVLELDLN  120
FPAPEEDQPD STFQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.11e-21C2H2 family protein