PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI25196.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

bHLH

Protein Properties

Length: 108aa MW: 12696.7 Da PI: 7.1826

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI25196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.5	1.7e-11	74	102	3	34
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...T CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskap 34 ++h+++E+rRRdriN+ +++Lr+l+Pk+ + MCI25196.1 74 KSHSQAEKRRRDRINTQLANLRKLIPKS---D 102 79*************************5...2 PP

Sequence ? help Back to Top
Protein Sequence Length: 108 aa Download sequence
MENYNNDSSE WQQQQQQHKH WSQYSSDDHS HFPTQILPHN VSDSSSASFQ YSEFQSWPLP 60 IEESLEDRAV SASKSHSQAE KRRRDRINTQ LANLRKLIPK SDKGREVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40200.1	1e-09	bHLH family protein