PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI25322.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 99aa    MW: 11538 Da    PI: 8.0406
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI25322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS103.82.4e-32199275374
        GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 lpres++r++vEr++l+r+ivn++aceg++r+er e ++kWr+rl++aGF++ p+s+++++ +k l+r++ +  y+ ++e g+l +gW+d++L+++SaW
  MCI25322.1   1 LPRESQDRVNVERQCLARDIVNIIACEGEDRIERYEVAGKWRARLKMAGFTSSPMSTNVEEAIKELIRQYCD-KYKXKQEMGALHFGWEDKNLIVASAW 98 
                 699********************************************************************5.5************************* PP

        GRAS 374 r 374
                 +
  MCI25322.1  99 K 99 
                 8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
LPRESQDRVN VERQCLARDI VNIIACEGED RIERYEVAGK WRARLKMAGF TSSPMSTNVE  60
EAIKELIRQY CDKYKXKQEM GALHFGWEDK NLIVASAWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.11e-48GRAS family protein