PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI25516.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

GRAS

Protein Properties

Length: 134aa MW: 15796.2 Da PI: 7.5208

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI25516.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	121.4	1.1e-37	2	134	156	288
GRAS 156 eeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFl 254 e++eetg+rLa+++++++vpfefn+++++++e++++e+L++ ++E+++Vn ++ ++lldes +++s+r++vL+l+++++P +++ + + ++ns+ F+ MCI25516.1 2 EKIEETGRRLANYCKRFNVPFEFNAIASRNWETIRVEDLKIGSNEVVVVNTLMRFKNLLDESIEVNSPRNAVLQLIRKINPAIFTQSIINGSYNSPFFA 100 6899*******************9999****************************************************************** PP GRAS 255 erflealeyysalfdsleaklpreseerikvEre 288 +rf eal ++salfd++++ +pre+e+r+++E+e MCI25516.1 101 TRFREALFHFSALFDMFDTVIPRENEHRMMMEKE 134 ******************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 134 aa Download sequence
MEKIEETGRR LANYCKRFNV PFEFNAIASR NWETIRVEDL KIGSNEVVVV NTLMRFKNLL 60 DESIEVNSPR NAVLQLIRKI NPAIFTQSII NGSYNSPFFA TRFREALFHF SALFDMFDTV 120 IPRENEHRMM MEKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29065.1	5e-59	GRAS family protein