PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI25567.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 102aa    MW: 11352 Da    PI: 10.2944
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI25567.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.49.2e-1211545499
                EETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 54 kksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                ++++r++lt+GW+ Fv+ ++L +gD v+F   + +++el+++v+r+
  MCI25567.1 11 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGEDGELRLGVRRA 54
                67899*************************..449999*****996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
CLYFLFLTNA GQPRRHLLTT GWSAFVNKKK LVSGDAVLFL RGEDGELRLG VRRAAQLKSG  60
SNFSSISGQQ LNLGSLTDIV NALSTRCAFS IHYNPRYFYG YS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.15e-35ARF family protein